As @nkozyra says, understanding what all the links do is hard, however there are automated ways of converting common types of webpage layouts into structure data for native presentation.
For example, our startup (shameless plug) utilizes a computer vision technology to automatically extract structured data from articles, images, products, and videos, etc: http://diffbot.com/products/automatic/. These can then be used to present native-experience views.
Hard, yes--but I disagree with the premise that you have to design for 40 years from now.
Unlike the Colosseum, web design can be changed. The NY Times e.g. has done a great job balancing their time-tested values with digital experimentation.
More seriously, as a more researchy/deep-tech startup, most of our stack is homegrown, to address the very specific needs of web-scale machine vision.